R Packages for Ecological Studies

The (Mc)R Language: The R Project for Statistical Computing

  • labdsv: Ordination and Multivariate Analysis for Ecology
  • ade4: Analysis of Ecological Data
  • ape: Analyses of Phylogenetics and Evolution
  • betapart: Partitioning beta diversity into turnover and nestedness components
  • ecodist: Dissimilarity-based functions for ecological analysis
  • ggplot2: An implementation of the Grammar of Graphics
  • knitr: dynamic report generation
  • nlme: Linear and Nonlinear Mixed Effects Models
  • Pierre Legendre‚Äôs lab: R packages for ecological analysis
    • ANOVA, permutation test, beta diversity, CCA, RDA, lmodel2, PCNM, and varpart etc.
  • PhD: Phylogenetic Diversity
  • Phylotools: Phylogenetic tools for ecologists
  • spatstat: Spatial Point Pattern analysis, model-fitting, simulation, tests
  • vegan: Community ecology packages
Xingfeng Si /
Published under (CC) BY-NC-SA in categories academic  software  tagged with vegan  ecology  environmental  evolution  statistics  R language